@article{Interpro2005,
author={Mulder and  N. J. and  Apweiler and  R. and  Attwood and  T. K. and  Bairoch and  A. and  Bateman and  A. and  Binns and  D. and  Bradley and  P. and  Bork and  P. and  Bucher and  P. and  Cerutti and  L. and  Copley and  R. and  Courcelle and  E. and  Das and  U. and  Durbin and  R. and  Fleischmann and  W. and  Gough and  J. and  Haft and  D. and  Harte and  N. and  Hulo and  N. and  Kahn and  D. and  Kanapin and  A. and  Krestyaninova and  M. and  Lonsdale and  D. and  Lopez and  R. and  Letunic and  I. and  Madera and  M. and  Maslen and  J. and  McDowall and  J. and  Mitchell and  A. and  Nikolskaya and  A. N. and  Orchard and  S. and  Pagni and  M. and  Ponting and  C. P. and  Quevillon and  E. and  Selengut and  J. and  Sigrist and  C. J. and  Silventoinen and  V. and  Studholme and  D. J. and  Vaughan and  R. and  Wu and C. H.},
title={InterPro, progress and status in 2005},
journal={Nucl. Acids Res.},
volume={33},
pages={--201},
month={January},
year={2005},
abstract={
InterPro, an integrated documentation resource of protein families, domains and functional sites, was created to integrate the major protein signature databases. Currently, it includes PROSITE, Pfam, PRINTS, ProDom, SMART, TIGRFAMs, PIRSF and SUPERFAMILY. Signatures are manually integrated into InterPro entries that are curated to provide biological and functional information. Annotation is provided in an abstract, Gene Ontology mapping and links to specialized databases. New features of InterPro include extended protein match views, taxonomic range information and protein 3D structure data. One of the new match views is the InterPro Domain Architecture view, which shows the domain composition of protein matches. Two new entry types were introduced to better describe InterPro entries: these are active site and binding site. PIRSF and the structure-based SUPERFAMILY are the latest member databases to join InterPro, and CATH and PANTHER are soon to be integrated. InterPro release 8.0 contains 11 007 entries, representing 2573 domains, 8166 families, 201 repeats, 26 active sites, 21 binding sites and 20 post-translational modification sites. InterPro covers over 78% of all proteins in the Swiss-Prot and TrEMBL components of UniProt. The database is available for text- and sequence-based searches via a webserver (http://www.ebi.ac.uk/interpro), and for download by anonymous FTP (ftp://ftp.ebi.ac.uk/pub/databases/interpro).},
abstract-url={http://www.cs.bris.ac.uk/Publications/pub_master.jsp?id=1040007},
keyword={Bioinformatics,Biological Computation},
pubtype={101}
}